Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGHTQQPSGRGNPRPAPSPSPVPGTVPGASERVALKKEIGLLSACTIIIGNIIGSGIFISPKGVLEHSGSVGLALFVWVLGGGVTALG-SLCYAELGVAIPKSGGDYAYVTEIFGGLAGF---LLLWSAVLIMYPTSLAVISMTFSNYVLQPVFPNCIPPTTASRVLSMACLMLLTWV----NSSSVRWATRIQDMFTGGKLLALSLIIGVGLLQIFQGHFEELRPSNAFAFWMTPSVGHLALAFLQGSFAFSGWNFLNYVTEEMV-----DARKNLPRAIFISIPLVTFVYTFTNIAYFTAMSPQELLSSNAVAVTFGE----KLLGYFSWVMPVSVALSTFGGINGYLFTYSRLCFSGAREGHLPSLLAMIHVRHCTPIPALLVCCGATAVIMLVGDTYTLINYVSFINYLCYGVTILGLLLLRWRRPALHRPIKVNLLIPVAYLVFWAFLLVFSFISEPMVCGVGVIIILTGVPIFFLGVFWRSKPKCVHRLTESMTHWGQELCFVVYPQDAPEEEENGPCPPSLLPATDKPSKPQ |
| 3OB6 Chain:A ((5-329)) | ----------------------------------ADAHKVGLIPVTLMVSGNIMGSGVFLLPAN-LASTG--GIAIYGWLV-TIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIG-AIAMVVIGVGYLSY----FFPILKDPL----VLTITCVVVL-WIFVLLNIVGPKMITRVQAVAT---VLALIPIVGIAVFGWFW-----FRGETYMAAWNVSGLGTFGA--IQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTA-IMGMIPNAALRVS--ASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVN-KAGTPVAGLIIVGILMTIFQLSSISPGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDA------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242976 for 2664 contacts (-91.2/contact) +
2D Compatibility (PS) -30996 + (NN) 1342 + (LL) 5800
1D Compatibility (HY) -30000 + (ID) 4300
Total energy: -301130.0 ( -113.04 by residue)
QMean score : 0.238
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