Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGELPGSEGMWENCPLGWVKKKASGTLAPLDFLLQRKRLWLWASEPVRPQPQGIHRFREARRQFCRMRGSRLTGGRKGFGSSGLRFGRGGFSEEVMPQPVLKAMRCAEGAWWFSPDGPAGSAASIWPAEGAEGLPGQLGRDRLEVVYSVPDNVPGQNGSRRPLVCKITGKCLSVCSEENAKAGGCSAFPLLLSQLGARMTGREHAHKGPELTTPDSGLPRPPNPALAGFRALAQHSPPLGTSTPSAVLLSAAT |
| 4GD5 Chain:A ((219-277)) | ---------------------------------------------------------------------------------------------------------------------------------------------KVDGVEATPENVLNKS-------YKVSRPFLAVYKEENLTESGKSFIDFILSEEGQDIVAKEHLIKVK-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GD5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3768 for 288 contacts (-13.1/contact) +
2D Compatibility (PS) -5725 + (NN) 3050 + (LL) 7236
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -3707.0 ( -12.87 by residue)
QMean score : 0.256
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