Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAEARVSRWYFGGLASCGAACC-----THPLDLLKVHLQTQQEVKLR------MTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMNSKGEYQGVFHCAVETAKLGPLAFYKGLVPAGIRLIPHTVLTFVFLEQLRKNFGIKVPS |
| 4C9J Chain:A ((124-317)) | ---EEGYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADAKS---ARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLK----------------FLLGWVVTTGASTCSYPLDTVRRRMM----MTSGQAVKYNGAIDCLKKIVASEGVGSLFKGCGANILR-SVAGAGVISMYDQLQMILFGKKF--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52354 for 1045 contacts (-50.1/contact) +
2D Compatibility (PS) -16681 + (NN) 471 + (LL) 7676
1D Compatibility (HY) -10000 + (ID) 2400
Total energy: -73288.0 ( -70.13 by residue)
QMean score : 0.176
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