Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHG-------KAMYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLL---MEDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRI-----QTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILKCFD |
| 4C9Q Chain:A ((22-297)) | --QQETNFAINFLMGGVSAAIAKTAASPIERVKILIQNQDEMIKQGTLDKKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNFAFKDKIKLMFGFKKE-GYGKWFAGNLASGGAAGALSLLFVYSLDFARTRL------------AADAKS-----------ARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLKPL----------FLASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQAVK-------YNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGVISMYDQLQMILFGK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91100 for 1729 contacts (-52.7/contact) +
2D Compatibility (PS) -25608 + (NN) -632 + (LL) 1900
1D Compatibility (HY) -14800 + (ID) 3600
Total energy: -133840.0 ( -77.41 by residue)
QMean score : 0.158
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