Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPSRLQLGLRAAYSGISSVAGFSIFLVWTVVYRQPGTAAMGGLAGVLALWVLVTHVMYMQDYWRTWLKGLRGFFFVGVLFSAVSIAAFCTFLVLAITRHQSLTDPTSYYLSSVWSFISFKWAFLLSLYAHRYRADFADISILSDF
2LKE Chain:A ((2-17))
-----------------------------------------------------------------------------------------------------------------------------LGFFKRQYKDMMSEGGPPGAE
General information:
TITO was launched using:
RESULT:
Template:
2LKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1423 for 54 contacts (-26.4/contact) +
2D Compatibility (PS) -1646 + (NN) -331 + (LL) 11088
1D Compatibility (HY) -1600 + (ID) 100
Total energy: 5988.0 ( 110.89 by residue)
QMean score : -0.308
(partial model without unconserved sides chains):
PDB file :
Tito_2LKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LKE-query.scw
PDB file :
Tito_Scwrl_2LKE.pdb
: