Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALDFLAGCAGGVAGVLVGHPFDTVKVRLQVQSVEKPQ------YRGTLHCFKSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRALGHDSP-------LNQFLAGAAAGAIQCVICCPMELAKTRL----QLQDAGPARTYKGSLDCLAQIYGHEGLRGVNRGMVSTLLRETPSFGVYFLTYDALTRALGCEPGDRLLVPKLLLAGGTSG----IVSWLST-------YPVDVVKSRLQADGLRGAPRYRGILDCVHQSYRAEGWRVFTRGLASTLLRAFPVNAATFATVTVVLTYARGEEAGPEGEAVPAAPAGPALAQPSSL |
| 4C9H Chain:A ((25-294)) | --IDFLMGGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKKEEGYAKWFAGNLASGGAAGALSLLFVYSLDYARTRLAADS-------ARQFNGLIDVYKKTLKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSL------K------------------LASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQ-AVKYDGAFDCLRKIVAAEGVGSLFKGCGANILRGVAGAGVISMYDQLQMILFGKKFK---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64048 for 1584 contacts (-40.4/contact) +
2D Compatibility (PS) -22551 + (NN) 2263 + (LL) 3108
1D Compatibility (HY) -17200 + (ID) 3250
Total energy: -101678.0 ( -64.19 by residue)
QMean score : 0.186
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