Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASVLSYESLVHAVAGAVGSVTAMTVFFPLDTARLRLQVD-----EKRKSKTTHMVLLEIIKEEGLLAPYRGWFPVISSLCCSNFVYFYTFNSLKALWVKGQHSTTGKDLVVGFVAGVVNVLLTTPLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFNPAIQFMFYEGLKRQLLKKRMKLSSLDVFIIGAVAKAIATTVTYPLQTVQSILRFGRHRLNPENRTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMGLKRAHQH |
1OKC Chain:A ((117-293)) | ------------ASGGAAGA-TSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGR-KGADIM---YTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI---------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73414 for 1142 contacts (-64.3/contact) +
2D Compatibility (PS) -17297 + (NN) 867 + (LL) 12648
1D Compatibility (HY) -10000 + (ID) 2150
Total energy: -89346.0 ( -78.24 by residue)
QMean score : 0.188
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