Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPAPRAREQPRVPGERQPLLPRGARGPRRWRRAAGAAVLLVEMLERAAFFGVTANLVLYLNSTNFNWT----GEQATRAALVFLGASYLLAPVGGWLADVYLGRYRAVALSLLLYLAASGLLPATAFPDGRSSFCGEMPASPLGPACPSAGCPRSSPSPYCAPVLYAGLLLLGLAASSVRSNLTSFGADQVM--DLGRDATRRFFNWFYWSINLGAVLSLLVVAFIQQNISFLLGYSIPVGCVGLAFFIFLFATPVFITKPPMGSQVSSMLKLALQNCCPQLWQRHSARDRQCAR--------VLADERSPQPGASPQEDIANFQVLVKILPVMVTLVPYWMVYFQMQS---------TYVLQGLHLHIPNIFPANPANISVALRAQGS----SYTIPEAWLLLANVVVVLILVPLKDRLIDPLLLRCKLLPSALQKMALGMFFGFTSVIVAGVLEMERLHYIHHNETVSQQIGEVLYNAAPLSIWWQIPQYLLIGISEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSSLVALLSLPGGWLHCPKDFGNINNCRMDLYFFLLAGIQAVTALLFVWIAGRYERASQGPASHSRFSRDRG |
4W6V Chain:A ((21-456)) | -----------------------------------SGLFLSEMWERFSFYGIRPLLILFMAATVFDGGMGLPREQASAIVGIFAGSMYLAALPGGLLADNWLGQQRAV-------WYGSILIALGHLSIALSAFFGN-------------------------DLFFIGLVFIVLGTGLFKTCISVMVGTLYKPGDARRDGG---FSLFYMGINMGSFIAPLLSGWLLRTHGWHWGFGI--GGIGMLVALLIFR----------GFAIPAMKRYDAEVGLDSSWNKPT------GRWVTAIMAVVVVIIALISQGVIPINPVMIASLLVYVIAASVTLYFIYLFAFAKMSRKDRARLLVCFILLVSAAFFWSAFEQKPTSFNLFANDYTDRMVMGFEIPTVWFQSINALFIILLAPVFSWA-----------PSSITKFVIG--------ILCAAAGFAVMMYAAQHVLSSGGAG-----VSPL---WLVMSILLLTLGELCLSPIGLATMTLLAPDRMRGQVMGLWFCASSLGNLAAGLIGGHVKADQLDMLPTLFARCSIALVICAAVLILLIVPIRRLM--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4W6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272581 for 3197 contacts (-85.3/contact) +
2D Compatibility (PS) -41036 + (NN) -16355 + (LL) 6720
1D Compatibility (HY) -35600 + (ID) 5150
Total energy: -364002.0 ( -113.86 by residue)
QMean score : 0.348
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