Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFSEILDRVGSMGHFQFLHVAILGLPILNMANHNLLQIFTAATPVHHCRPPHNASTGPWVLPMGPNGKPERCLRFVHPPNASLPNDTQRAMEPCLDGWVYNSTKDSIVTEWDLVCNSNKLKEMAQSIFMAGILIGGLVLGDLSDRFGRRPILTCSYLLLAASGSGAAF----------SPTFPIYM--------VFRFLCGFGISGITLSTVILNVEWVPTRMRAIMSTALGYCYTFGQFILPGLAYAIPQ-----------WRWLQLTVSIPFFVFFLSSWWTPESIRWLVLSGKSSKALKILRRVAVFNGKKEEGERLSLEELKLNLQKEISLAKAKYTASDLFRIPMLRRMTFCLSLAWFATGFAYYSLAMGV--------EEFGVNLYILQ-IIFGGVDVPAKFITILSLSYLGRHTTQ-AAALLLAGGAI-LALTFVPLDLQTVRTVLAVFGKGCLSSSFS-CLFLYTSELYPTVIRQTGMGVSN----LWTRVGSMVSPLV-KITGEVQPFIPNIIYGITALLGGSAALFLPETLNQPLPETIEDLEN-WSLRAKKPKQEPEVEKASQRIPLQPHGPGLGSS |
| 4JA4 Chain:A ((53-479)) | ---------------------------------------------------------------------------------------------------------------------ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLM----QEQAEGILRKIM--------GNTLATQAVQ---EIKHSLDHG----------------MFGVGVIVIGVMLSIFQQFVGINVVLYYAPEV------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSW------NGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192712 for 2578 contacts (-74.8/contact) +
2D Compatibility (PS) -35791 + (NN) -3908 + (LL) 10352
1D Compatibility (HY) -33600 + (ID) 4700
Total energy: -260359.0 ( -100.99 by residue)
QMean score : 0.211
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