Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFQDLLGHAGDLWRFQILQTVFLSIFAVATYLHFMLENFTAFIPGHRCWVHILDNDTVSDNDTGALSQDALLRISIPLDSNMRPEKCRRFVHPQWQLLHLNGTFPNTSDADMEPCVDGWVYDRISFSSTIVTEWDLVCDSQSLTSVAKFVFMAGMMVGGILGGHLSDRFGRRFVLRWCYLQVAIVGTCAA---------------------LAPTFLIYCSLRFLSGIAAMSLITNTIMLIAEWATHR-------FQAMGITLGM----CPSGIAFMTLAGLA--FAIRDWHILQLVVSVPYFVIFLTSSWLLESARWLIINNKPEEGLKELRKAAHRSGMKNARDTLTLEILKSTMKKELEAAQKKKPSLCEMLHMPNICKRISLLSFTRFA--NFMAYFGLNLHVQHLG--NNVFLLQTLFGAVILLANCV-APWALKYMNRRASQMLLMFLLAICL--LAIIFVPQEMQTLREVLATLGLGASALA-NTLAFAHGNEVIPTIIRARAMGINATFANIAGALA----PLM----MILSVYSPPLPWIIYGVFPFISG-FAFLLLPETRNKPLFDTIQDEKNERKDPREPKQEDPRVEVTQF |
| 4GC0 Chain:A ((67-479)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------GCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIY---RIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVN--YFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKI-----MGNTLATQAVQ----EIKHSLDHGRKTGGRLL-MFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVF-KTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL-----EELEALWE---------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -209792 for 2959 contacts (-70.9/contact) +
2D Compatibility (PS) -37740 + (NN) -16466 + (LL) 13460
1D Compatibility (HY) -31600 + (ID) 5000
Total energy: -287138.0 ( -97.04 by residue)
QMean score : 0.222
|
|
|