Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFEELLSQVGGLGRFQMLHLVFILPSLMLLIPHILLENFAAAIPGHRCWVHMLDNNTGSGNETGILSEDALLRISIPLDSNLRPEKCRRFVHPQWQLLHLNGTIHSTSEADTEPCVDGWVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAP----------TFPVY--------CVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIIL----------GGLAYVFRD-WQTLHVVASVPFFVFFLLSRWLVESARWLIITNKLDEGLKALRKVARTNGIKNAEETLNIEVVRSTMQEELDAAQTKTTVCDLFRNPSMRKRICILVFLRFA--NTIPFYGTMVNLQHVGSNIFLLQ-VLYGAVALIVRCLALLTLNHMGRRISQIL--FMFLVGLSILANTFVPKEMQTLRVALACLGIGCSAATFSSVA-VHFIELIPTVLRARASGIDLTASRIGAALA----PLL----MTLTVFFTTLPWIIYGIFPIIGGLIVF-LLPETKNLPLPDTIKDVENQKKNLKEKA |
| 4JA4 Chain:A ((65-479)) | --------------------------------------------------------------------------------------------------------------------------------------------------------LIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLM----QEQAEGILRKI--------MGNTLATQAVQE-IKHSLDHG--------MFGVGVIVIGVMLSIFQQFVGINVVLYYAPEV----------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSW------NGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -246324 for 2529 contacts (-97.4/contact) +
2D Compatibility (PS) -34593 + (NN) -3848 + (LL) 13688
1D Compatibility (HY) -35600 + (ID) 4350
Total energy: -311027.0 ( -122.98 by residue)
QMean score : 0.191
|
|
|