Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQEARVLRAAGGFGRARRLLASASWVPCIVLGLVLSSEELLTAQPAPHCRPDPTLLPPALRALRGPALLDAAIPRLGPTRAPAEALGVLSPSYLAPLTRAPRPSSWASCSGAAAGPTWNLVCGDGWKVPLEQVSHLLGWLLGCVI---LGAGC-DRFGRRA--VFVASLVLTTGLGAS----------------EALAASFPTLLVLRLLHG-GT-LAGALLALYLARLELCDPPHRLAFSMGAGLFSVV-GTLLLPGLAALV-----------QDWRLL---QGLGALMSGLLLLFWGFPALFPESPCWLLATGQVARARKILWRFAEASGVGPGDSSLEENSLATATELTMLSARSPQPRYHSPLGLLRTRVTWRNGLILGFSSLVGGGIRASFRRSLAPQVPTFYLPYFLEAGLEAAAL-------------VFLLLTADCCGRRPVLLLGT--MVTGLASLLLLAGAQYLPGWTVLFLSVLGLLASRAVS--ALSSLFAAEVFPTVIRGAGLGLVLGAGFLGQA----------AGPLDTLHGRQGFFLQQVVFASLAVLALLCVL-LLPESRSRGLPQSLQDADRLRRSPLLRGRPRQDHLPLLPPSNSYWAGHTPEQH |
| 4JA4 Chain:A ((65-473)) | --------------------------------------------------------------------------------------------------------------------------------------------LIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELA---PAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLF-LMLLY-----TVPESPRWLM----QEQAEGIL-------------RKIMGNTLAT---------QAVQEIKHS---LDHG--------MFGVGVIVIGVMLSIFQQFVGINVVLYYAPEV--------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ-APG-IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSW------NGF--SYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212316 for 2135 contacts (-99.4/contact) +
2D Compatibility (PS) -32095 + (NN) -15760 + (LL) 12696
1D Compatibility (HY) -36000 + (ID) 5250
Total energy: -288725.0 ( -135.23 by residue)
QMean score : 0.087
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