Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDFLMSGLAACGACVFTNPLEVVKTRMQLQGELQAPGTYQRHYRNVFHAFITIGKVDGLAALQKGLAPALLYQFLMNGIRL-------GTYGLAEAGGYLHTAEGTHSPARSAAAGAMAGVMGAYLGSPIYMVKTHLQAQAASEIAVGHQYKHQGMFQALTEIGQKHGLVGLWRGALGGLPRVIVGSSTQLCTFSSTKDLLSQWEIFPPQSWKLALVAAMMSGIAVVLAMA----PFDVACTRLYNQPTDAQGKGLMYRGILDALLQTARTEGIFGMYKGIGASYFR-LGPHTILSLFFWDQLRSLYYTDTK
4C9H Chain:A ((25-313))IDFLMGGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKKEEGYAKWFAG------NLASGGAAGALSLLFVYSLDYARTRLAADS-------AR-QFNGLIDVYKKTLKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSLK------------------LASFLLGWVVTTGASTCSYPLDTVRRRMMM----TSGQAVKYDGAFDCLRKIVAAEGVGSLFKGCGANILRGVAGAGVISMY--DQLQMILFGKKF


General information:
TITO was launched using:
RESULT:

Template: 4C9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84414 for 1888 contacts (-44.7/contact) +
2D Compatibility (PS) -26820 + (NN) -1507 + (LL) 2588
1D Compatibility (HY) -16000 + (ID) 3250
Total energy: -129403.0 ( -68.54 by residue)
QMean score : 0.206

(partial model without unconserved sides chains):
PDB file : Tito_4C9H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C9H-query.scw
PDB file : Tito_Scwrl_4C9H.pdb: