Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPETRGQEIIKVTPLQQMLASCTGAILTSVIVTPLDVVKIRLQAQNNPLPKGKCFVYSNGLMDHLCVCEEGGNKLWYKKPGNFQGTLDAFFKIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLSALLRSKLGENETCIPIVAGIVARFGAVTVIS-----PLELIRTKM-----QSKKFSYVELHRFVS---KKVSEDGWISLWRGWAPTVLRDVPFSAMYWYNYEILKKWLCEKSGLYEPTFMINFTSGALSGSFAAVATLPFDVVKTQKQTQLWTYESHKISMPLHMSTWIIMKNIVAKNGFSGLFSGLIPRLIKIAPACAIMISTYE------FGKAFFQKQNVRRQQY |
| 4C9Q Chain:A ((38-319)) | -------------------------AAIAKTAASPIERVKILIQNQDEMIKQGT--------LDK-----------------KYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNFAFKDKIKLMFGFK--KE-GYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADAKS-----ARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLKPL-----------FLASFLLGWVVTTGASTCSYPLDTVR--RRMMMTSGQAVKYNGAID-----CLKKIVASEGVGSLFKGCGANILR-SVAGAGVISMYDQLQMILFGK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65946 for 1775 contacts (-37.2/contact) +
2D Compatibility (PS) -25155 + (NN) 6276 + (LL) 5784
1D Compatibility (HY) -14400 + (ID) 3300
Total energy: -96741.0 ( -54.50 by residue)
QMean score : -0.008
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