Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPVEEFVAGWISGALGLVLGHPFDTVKVRLQTQ----------TTYRGIVDCMVKIYRHESLLGFFKGMSFPIASIAVVNSVLFGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYTPEGQNPSSATVLVAGGFAG-IASWVAAT-------PLDMIKSRMQMDGLRRRVYQGMLDCMVSSIRQEGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRWWG |
| 4C9J Chain:A ((30-299)) | ----NFLMGGVSAAIAKTAASPIERVKILIQNQDEMIKQGTLDKKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNFAFKDKIKLMF---GFKKEEGYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADAKS-----AR--QFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSL---------K--------------FLLGWVVTTGASTCSYPLDTVRRRMMMTSGQAVKYNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGVISMYDQLQMILFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81853 for 1692 contacts (-48.4/contact) +
2D Compatibility (PS) -23591 + (NN) 2749 + (LL) 1180
1D Compatibility (HY) -11600 + (ID) 2850
Total energy: -115965.0 ( -68.54 by residue)
QMean score : 0.089
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