Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRALSLLLALCLCLSLMPAASASVVESTVQVGPYTFEIWFDGT-ATLTRYDESLAGSTYADIPASVTDENGQEYPVTVIGEKAFEET-NITGVTVPDSVISIGRLAFAYCNSLSDVKLSENLIYINELAFASCDA----------------------LKEITIPASVEKMD-NPFRWSNALDTVYMEGMVAPE
4FS7 Chain:A ((88-263))
---------FAFENCSKL---EIINIPDSVKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGC--DFKEITIP-EGVTVIGDEAFATCESLEYVSLPDSMETLHNGLFSGCGKLKSIKLPRNLKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNN----
General information:
TITO was launched using:
RESULT:
Template:
4FS7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81107 for 1029 contacts (-78.8/contact) +
2D Compatibility (PS) -14863 + (NN) 3139 + (LL) 1700
1D Compatibility (HY) -12400 + (ID) 1900
Total energy: -105431.0 ( -102.46 by residue)
QMean score : 0.258
(partial model without unconserved sides chains):
PDB file :
Tito_4FS7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FS7-query.scw
PDB file :
Tito_Scwrl_4FS7.pdb
: