Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKRLLTVAAFALAGCVTVVAQDKKKEFKMPTGYAGITHEMSEFYEPVPPVVTPGTDLKGGGFTAPSDAIVLFDGKDLSAWESVKGGAAEWDVHDGVFTVNKKKGDIQTKQKFNDFQMHIEWQVPTNITGESQSRGNSGIFLQ---------GMYEVQVLDCYNNP---TYVNGQTGSIYKQSIPLA-NAMRKPGEWNVYDIIYTAPTFKEDGSYRTHPTVTVIQNGVVLQNHTTILGTT---------EWIGFP--QVK-KHGAGPIILQ-SHGDPSEPISFRNIWIREL |
| 3IMM Chain:A ((5-201)) | ------------------------------------------------------------------NKWKPLF-GKNLENANY---NPEVWSETDGVLGAVK-DESIWTKDEYENFELDLDFKTDV--------GTNSGVVVYCTDTKDWIPNSVEIQIADDHCEKWGNGKPYEKCGAIYGHLGAVQDKVVKKPGEWNHMRIKCAG------------QHIMVILNGKKVTEM-DMSKWTSGTKNPDGSDIPSWLPKPFAELPTKGFIGLQGKHGD--SLIWFRNIKIRSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82831 for 1317 contacts (-62.9/contact) +
2D Compatibility (PS) -18413 + (NN) -2751 + (LL) 4128
1D Compatibility (HY) -8000 + (ID) 2500
Total energy: -110367.0 ( -83.80 by residue)
QMean score : 0.346
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