Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQQFQTIALIGIGLIGSSIARDIREKQL--AGTIVVTTRSEATLKRAGELGLGDRYTLSAAEAVEGADLVVVSVPVGASGAVAAEIAAHLKPGA-IVTDVGSTKGSVIAQMAPHLPKDVHFVPGHPIAGTEHSGPDAGFAGLFRGRWCILTPPAGTDEEAVARLRLFWETLGSMVDEMDPKHHDKVLAIVSHLPHIIAYNIVGTADD--LETVTESEVIKYSASGFRDFTRLAA---SDPTMWRDVCLHNKDAILEMLARFSEDLASLQRAIRWGDGDKLFDLFTRTRAIRRSIVQAGQDTAMPDFGRHAMDQK |
| 2RCY Chain:A ((5-260)) | -----IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKNTTLNYMS--------SNEELARHCDIIVCAVKPDIAGSVLNNIKPYLS-SKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPCLVGE------G--------SFIYCSNKNVNSTDKKYVNDIFNSCGI-IHEIKEKDMDIATAISGCGPAYVYLFIESLIDAGVKNGLSRELSKNLVLQTIKGSVEMVKKSDQPVQQLKDNIVSPGGITAVGLYSLEKN------SFKYTVMNAVEAACEKSKAM------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113758 for 1799 contacts (-63.2/contact) +
2D Compatibility (PS) -26353 + (NN) -40 + (LL) 3324
1D Compatibility (HY) -12000 + (ID) 1850
Total energy: -150677.0 ( -83.76 by residue)
QMean score : 0.280
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