Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGTGADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKSMLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAAVSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLDMAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTP---LLAARGDEIVNFPQVRSC-G-TSTAHSLPCMFSTF-DRTD---YDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCK-G--------VCGKVPNTDVTSLNLPE-YCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYTEAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDD-LESVVHYVSDHGESLGENG-----MYL--HAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENEYSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR |
| 2W8D Chain:A ((33-340)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVIYVSLESLQSFIIDYKIDGKEVTPFLNKLAHDN-ETFYFDNFFHQTGQGKTSDAEFMMENSLYPLAQGSVFVNKAQNTLQSVPAILKSKNYTSATFHGNTQTFWNRNEMYKAEGIDKFF--DSAYYDMNEENTKNYGMKDKPFFKESMPLLESLPQPFYTKFITLSNHFPFG---MDEGDTDFPAGD--------FGDSVVDNYFQSAHYLDQSIEQFFNDLKKDGLYDKSIIVMYGDHYGISENHNKAMAKVLGKDEITDYDN--AQLQRVPLFIHAAG-V-K--G--------EKVHKYAGDVDVAPTILHLLGVDTKDYLMSGSDILSKEH--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123397 for 2261 contacts (-54.6/contact) +
2D Compatibility (PS) -29983 + (NN) -10510 + (LL) 21824
1D Compatibility (HY) -10400 + (ID) 2150
Total energy: -154616.0 ( -68.38 by residue)
QMean score : 0.147
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