Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRSTSNGSAEEVRKAAYLVFIYHTFIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPEPGTLLH
3MM4 Chain:A ((987-1028))
----------------------------------------------------------RVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALRLVTE----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3MM4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16118 for 230 contacts (-70.1/contact) +
2D Compatibility (PS) -4447 + (NN) -2269 + (LL) 6572
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -18112.0 ( -78.75 by residue)
QMean score : 0.030
(partial model without unconserved sides chains):
PDB file :
Tito_3MM4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MM4-query.scw
PDB file :
Tito_Scwrl_3MM4.pdb
: