Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARGLPTIASLARLCQKLNRLKPLEDSTMETSLRRCLSTLDLT-LLGVGGMVGSGLYVLTGAVAKEVAGPAVLLSFGVAAVASLLAALCYAE---FGARVPRTGSAYLFTYVSMGELWAFL-----IGWNVLLEYIIGGAAVARAWSGYLDSMFSHSIRNFTETHVGSWQVPLLGHYPDFLAAGIILLASAFVSCGARVSSWLNHTFSAISLLVILFIVILGFILAQPHNWSADEGGFAPFGFSGVMAGTASCFYAFV----GFDVIAASSEEAQNPRRSVPLAIAISLAIAAGAYILV--STVLTLMVPWHSLDPDSALADAFYQRGYRWAGFIVAAGSICAMNTVLLSLLFSLPRIVYAMAADGLFFQVFAHVHPRTQVPVAGTLAFGLLTAFLALLLDLESLVQFLSLGTLLAYTFVATSIIVLRFQKSSPPSSPGPASPGPLTKQQSSF-SDHLQLV-----GTVHASVPEPGELKPALRPYLGFLDGYSPGAVVTWALGVMLASAITIGCVLVFGNSTLHLPHWGYILLLLLTSVMFLLSLLVLGAHQQQYREDLFQIPMVPLIPALSIVLNICLMLKLSYLTWVRFSIWLLMGLAVYFGYGIRHSKENQRELPGLNSTHYVVFPRGSLEETVQAMQPPSQAPAQDPGHME-- |
| 2J7U Chain:A ((8-618)) | ----------MDVIGERIKRIKEEHNSTWHYDDENPYKTWAYHGSYEVSSMINGVVKLLT----KPWDVVPMVTQMAMTDTTPFGQQRVFKEKVDTRTPRPLPGTRKVMEIT-AEWLWRTLGRNKRPRLCTREEFTKKVRTNDSAKAAVEDEEFWKLVDRERELHKLGKCGSCVSRAIWYMWLGARYLEFEALG----------------------FLNEDHWFSRENSYSGVEGEGLHKLGYILRDISKIPGGAMYADDTAGWDTRI-TEDDLHNEEKIIQQMDPEHRQLANAIFKLTYQNKVVKVQRP----TPTGTVMDIISRKDQR--------GSGQVGTYGLNTFTNMEAQLVRQMEGEGVLTKADLE-----NPHLLEKKITQWLETKGVERLKRMAISGDDCVVKPIDDRFANALLALNDMGKVRKDIPQWQPSKGWHDWQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRAR--------ISQGAGWSLRETACLGKAYAQMWSLMY----FHRRDLRLASNAICSAV---------------PVHWVPTSRTTWSIHAHHQWMTTEDMLTVWNRVWIEENPWMEDKTPVTTWENVPYLGKREDQWCG---SLIGLTSRATWAQNIPTAIQQVRSLIGNEEFLDYM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -434265 for 4456 contacts (-97.5/contact) +
2D Compatibility (PS) -55960 + (NN) 2148 + (LL) 6228
1D Compatibility (HY) 1600 + (ID) 3700
Total energy: -483949.0 ( -108.61 by residue)
QMean score : 0.173
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