Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------MALDFLAGCAG-----GVAGVLVGHPFDTVKVRLQVQSVEKPQYRGT-----LHCFKSIIKQES--------------VLGLY----------------KGLGSPLMGLTFI-NALVFGVQGNTLRALGH------------------------------------DSPLNQFLAGAAAGAI-QCVICCPMELAKTRLQLQDAGPARTYKGSLDCLAQIYGH--------EGLRGVNRGMVS------TLLR--ETPSFGVYFLTYDALTRALG--CEPGDRLLVPKLLLA--GGTSGIVSWLSTY------PVDVVKSRLQADGLRGAPRYRG--ILDCVHQSYR-AEGWRVFTRGLASTLLRAFPVNAATFATVTVVLTYARG--EEAGPEGEAVPAAPAGPALAQPSSL |
| 1K0E Chain:A ((3-453)) | TLSPAVITLLWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYSRFDIVVAEPICTLTTFGKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPFQGGALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDVNARRAWLESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRFHATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGTLPRANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPFPAVHHLVSTITAQLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCGSIGYLSFCGNMDTSITIRTLTAINGQIFCSAGGGIVADSQEEAEYQETFDKVNRILKQLEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K0E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150038 for 2280 contacts (-65.8/contact) +
2D Compatibility (PS) -31936 + (NN) -186 + (LL) 0
1D Compatibility (HY) -11200 + (ID) 2250
Total energy: -195610.0 ( -85.79 by residue)
QMean score : 0.209
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