Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MARRTEPPDGGWGWVVVLSAFF----QSALVFGVLRSFGV-------FFVEFVAAFEEQAARVSWIASIGIAVQQFG------SPVGSALSTKFGPRPVVMTGGILAALGMLLASFATSLTHLYLSIGLLSGSGWALTFAP--TLACLSCYFSRRRSLATGLALTGVGLSSFTFAPFFQWLLSHYAWRGSLLLVSALSLHLVACGALLRPPSLAEDPAVGGPRAQLTSLLHH-----GPFLRYTVALTLINTGYFIPYLHLVAHLQDLDWDPL-----PAAFLLSVVAIS-----DLVGRVV--SGWLGDAVP----GPVTRLLMLWTTLTGVSLALFPVAQAPTALVALAVAYGFTSGALAPLAFSVLPELIGTRRIYCGLGLLQMIESIGGLLGPPLSGYLRDVTGNYTASFVVAGAFLLSGSGILLTLPHFFCFSTTTSGPQDLVTEALDTKVPLPKEGLEED----------- |
| 4C2E Chain:A ((2-436)) | ADSERDKAMDKIEKAYELISNEYVEKVDREKLLEGAIQGMLSTLNDPYSVYMDKQTAKQFSDSLDSSFEGIGAEVGMEDGKIIIVSPFKKSPAEKAGLKP---NDEIISINGESMAG--KDLNHAVLKIRGKKGSSVSMKIQRPGTKKQLSFRIKRAEIPLETVFASEKKVQGHSVGYIAISTFSEHTTEDFAKALRELEKKEIE-GLVID---VRGNP--GGYIQSVEEILKHFVTKDQPYIQIAE-----RNGDKKRYFSTLTHKKAYPVNVITDKGSAAASEILAGALKEAGHYDVVGDTSFGKGTVQQAVPMGDGSNIKLTLYKWLTPNGN----WIHKKGIEPTIAIKQPDYFSAGPLQLK--EPLKVDMNNEDVKHAQVLLKGLSFDPG----REDGYFSKDMKKAVMAFQDQN--KLNKTGII----------------DTRTAETLNQQIEKKKSDEKNDLQLQTALKSLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228921 for 2787 contacts (-82.1/contact) +
2D Compatibility (PS) -40126 + (NN) 1834 + (LL) 3312
1D Compatibility (HY) -1200 + (ID) 3500
Total energy: -268601.0 ( -96.38 by residue)
QMean score : 0.116
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