Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MPAPRAREQPRVPGERQ-------------PLLPRGARG---PRRWRRAAGAAVLLVEMLER-AAFFGVTANLVLYLNSTNFNWTGEQATRAALVFLGASYLLAPVGGWLADVY-------LGRYRAVALSLLLYLAASGLLPATAFPDGRSSFCGEMPASPLGPACPSAGCPRSSPSPYCAPVLYAGL-LLLGLAASSVRSNLTSFGADQVMDLGRDATRRFFNWFYWSINLGAVLSLLVVAFIQQNISFLLGYSIPVGCVGLAFFIFLFATPVFITKPPMGSQVSSMLKLALQNCCPQLWQRHSARDRQCARVLADERSPQPGASPQEDIANFQVLVKILPVMVTLVPYWMVYFQMQSTYVLQGLHLHIPNIFPANPANISVALRAQGSSYTIPEAWLLLANVVV--VLILVPLKDRLIDPLLLRCKLLPSALQKMALGM-FFGFTSVIVAGVLEMERLHYIHHN-----------ETVSQQIGEVLYNAAPLSIWWQIPQYLLIGIS-----EIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSSLVALLSLPGGWLHCPK--DFGNINNCRMDLYFFLLAGIQAVTALLFVWIAGRYERASQGPASHSRFSRDRG |
| 4Y9J Chain:A ((1-592)) | TITARHTQYSHAKTGGFSQTGPTLHNPYKDDPILDRTLRRLLPESEYMRVAADLSKFGDRITSEVEHLGRQAELEQPRLEHQDAWGKRVDKLIVCNEWHKLKQICAEEGVISIGYEDSVDPFVRRIHQVAKLFLFSPSAGLVSCPMAMTDGAVKTLTSL--NLYGKHKLATEAVDRLRSRDPSKAWTSGQWMTEKKGGSDVAGGCDTYAVQIDKD-----TYRLHGYKWFSSAVDADVALTLARIVDSD-----GNALE-GSRGLSLFLLK------IRDESGNLNGIQMVRLKNKLGTKQLPTAELLLDGAIAERIGDQGRGVAGISNMLNITRIHNAVASLGYMRRIISLARDYSTKRVVF---GQTQSKWPLHTTTLAKMEVDTR--GSMLLLFEAARLLGLSEAGKSSDVEAMMLRLITPVL-KLYAGKQAVPMVSEGIECFG-----GQGYMEDTGLPTLLRDAQVTPIWEGTTNVLSLDVLRVFSGKENILLAFGKRVEQLLGNTKTEDEKLKKSKEAVESALKQLQKLLVKASDSAIQGETRIDSVARHIAFTIARIYSGALLIDHASDSSVANQSDIEVAYRYCCE-QPLIDLRWEWFASERVKADREIV-FDNFT---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -394240 for 4456 contacts (-88.5/contact) +
2D Compatibility (PS) -55716 + (NN) -2997 + (LL) 3148
1D Compatibility (HY) -4800 + (ID) 4700
Total energy: -459305.0 ( -103.08 by residue)
QMean score : 0.201
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