Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVISTINQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTK--EIVTMDDEENTEEKIGDDKINAT---------YMWISKDKKYLTIEFQYYSTHSED---------KKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSP-----DHLGEGYVSFKLDKIEE----QIEG--KKGLNIRVRT--L-------YDGIKNYKVQFP
3NQI Chain:A ((9-242))---------------------------------PQQWAGVVKVNDRMGY-VTFTDAAGTELIPTNTIPV----TLNARMAYIYCQVDEGQ-----KSIKITLLADPTGIDATAITTPKVGESGDVTTNAPVGSLSFVSGYSTVAPFQFS-ENTIVLPVLYRVK-NVTTTEDIKNELAKHTFTLVCYTD--------DIKSGDTILKLYLRYKVEDEPAAIAERATRTSSFKAYEISQILREYTLKSGQTKPAKITIVAQQNEYNNKLEDTSTIEKVYEIEY-


General information:
TITO was launched using:
RESULT:

Template: 3NQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47649 for 1286 contacts (-37.1/contact) +
2D Compatibility (PS) -20560 + (NN) -7268 + (LL) 3216
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -79011.0 ( -61.44 by residue)
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_3NQI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NQI-query.scw
PDB file : Tito_Scwrl_3NQI.pdb: