Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVISTINQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTK--EIVTMDDEENTEEKIGDDKINAT---------YMWISKDKKYLTIEFQYYSTHSED---------KKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSP-----DHLGEGYVSFKLDKIEE----QIEG--KKGLNIRVRT--L-------YDGIKNYKVQFP |
3NQI Chain:A ((9-242)) | ---------------------------------PQQWAGVVKVNDRMGY-VTFTDAAGTELIPTNTIPV----TLNARMAYIYCQVDEGQ-----KSIKITLLADPTGIDATAITTPKVGESGDVTTNAPVGSLSFVSGYSTVAPFQFS-ENTIVLPVLYRVK-NVTTTEDIKNELAKHTFTLVCYTD--------DIKSGDTILKLYLRYKVEDEPAAIAERATRTSSFKAYEISQILREYTLKSGQTKPAKITIVAQQNEYNNKLEDTSTIEKVYEIEY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47649 for 1286 contacts (-37.1/contact) +
2D Compatibility (PS) -20560 + (NN) -7268 + (LL) 3216
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -79011.0 ( -61.44 by residue)
QMean score : 0.378
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