Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKKILGLLGLALAAAFVLTACGQKNDKNTLTVGVMTMTDSDKERWDKIEELLKKENIKLKFKEFTDYSQPNKALKNGEIDINSFQHYNFLNNWNKEN-KGDLVTVAETYISPINLFSGTENGKAKYSSAKEIPNGGQIAIPNDATNESRALYVLQDAGLIKLNVSGDE-LATVKNIKSNPKNLDIKEVDASQTARNLAS--VDAAVVNNSYAVPAKIDF-KTSLYKEKVNEGSKQWINIIAAQKNWKKSKKAAAIKKLIKAYHTDAVKKVIKKTAKGVDEPVW |
| 4GOT Chain:A ((3-248)) | --------------------------SGKKEIVVAATKTP--HAEILKEAEPLLKEKGYTLKVKVLSDYKMYNKALADKEVDANYFQHIPYLEQEMKENTDYKLVNAGAVHLEPFGIYS------KTYKSLKDLPDGATIILTNNVAEQGRMLAMLENAGLITLDSKVETVDATLKDIKKNPKNLEFKKVAPELTAKAYENKEGDAVFINVNYAIQNKLNPKKDAIEVEST--KNNPYANIIAVRKG---EEDSAKIKALMEVLHSKKIKDFIEKKYDGAVLPVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GOT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30484 for 2007 contacts (-15.2/contact) +
2D Compatibility (PS) -25907 + (NN) -11475 + (LL) 2656
1D Compatibility (HY) -14800 + (ID) 4150
Total energy: -84160.0 ( -41.93 by residue)
QMean score : 0.372
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