Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MVDLKID-VSDDEEAEKIIREIREQWP---KATVTRTNGDIKLDAQTEK-EAEKMEKAVKKVKPNATIRKTGGSLEHHHHHH
1AW0 Chain:? ((1-72))
LTQETVINIDGMTCNSCVQSIEGVISKK-PGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLSD------------
General information:
TITO was launched using:
RESULT:
Template:
1AW0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17153 for 436 contacts (-39.3/contact) +
2D Compatibility (PS) -7122 + (NN) -5258 + (LL) 380
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -32503.0 ( -74.55 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_1AW0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AW0-query.scw
PDB file :
Tito_Scwrl_1AW0.pdb
: