Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFLAILDLKSLVLNAINYWGPKNNNGIQGGDFGYPISEK-QIDTSIITSTHPRLIPHDLTIPQNLETIFTTTQVLTNNTDLQQSQTVSFAKKTTTTTSTSTTNGWTEGGKISDTLEEKVSVSIPFIGEGGGKNSTTIEANFAHNSSTTTFQQASTDIEWNISQPVLVPPRKQVVATLVIMGGNFTIPMDLMTTI--DSTEHYSGYPILTWISSPDNSYNGPFMSWYFANWPNLPSGFGPLNSDNTVTYTGSVVSQVSAGVYATVRFDQYDIHNLRTIEKTWYARHATLHNGKKISINNVTEMAPTSPIKTN |
| 1W3F Chain:A ((130-308)) | ------------------FWNHPQT---EVFDDQYFTFLFEDMSIDKIEY------DLKDGRILSSTPNVLATQTLENTSSQTQEMSFNLSQTLTQTSTFAYTAGFTIAVGT------AFKAGVPIFAETEFK--VDISVDNQ----WNWGEENTFSKTYTATFSVRAGPGETVKAVSTVDSGIINVPFTAYLSSKSTGFEV-----TTEGIWRGVSSWDLRH----------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15287 for 1155 contacts (-13.2/contact) +
2D Compatibility (PS) -19695 + (NN) -11366 + (LL) 7072
1D Compatibility (HY) 800 + (ID) 1350
Total energy: -39826.0 ( -34.48 by residue)
QMean score : 0.171
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