Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPFNAPPVV--GTELDYMQSAMGSGKLCGD-GGFTRRCQQWLEQRFGSAKVLLTPSCTASLEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRPDTMNIDETLIEAAITDKTRVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQAAYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGRIELPSIPDGCVQNAHMFYIKLRDI---DDRSALINFLKEAEIMAVFHYIP-LHGCPAGEHFGEFHGEDRY--TTKESERLLRLPLFYNLSPVNQRTVIATLLNYFS |
| 2PO3 Chain:A ((22-383)) | --LVGRPNRIDRARLYERLDRALDSQWL-SNGGPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAGL-TG-EVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGVHLWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNAF-EGGAVVTDDADLAARIRALHNFGFD---------LPGGSPAGGTNAKMSEAAAAMGLTSLDAFPEVIDRNRRNHAAYREHLADL---PGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRG----QPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -265922 for 3202 contacts (-83.0/contact) +
2D Compatibility (PS) -39140 + (NN) -21994 + (LL) 1556
1D Compatibility (HY) -10400 + (ID) 4600
Total energy: -340500.0 ( -106.34 by residue)
QMean score : 0.542
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