Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQQFQTIALIGIGLIGSSIARDIREKQLAGTIVVTTRSEATLKRAGEL-GLGDRYTLSAAEAVEGADLVVVSVPVGASGAVAAEIAAHLKPGAIVTDVGSTKGSVIAQMAPHLPKDVHFVPGHPIAGTEHSGPDAGFAGLFRGRWCILTPPAGTDEEAVARLRLFWETLGSMVDEMDPKHHDKVLAIVSHLPHIIAYNIVGTADDL--ETVTESEVIKYSASGFRDFTRLA---ASDPTMWRDVCLHNKDAILEMLARFSEDLASLQRAIRWGDGDKLFDLFTRTRAIRRSIVQAGQDTAMPDFGRHAMDQK |
| 2AHR Chain:A ((4-234)) | -----MKIGIIGVGKMASAIIKGLKQTP--HELIISGSSLERSKEIAEQLAL--PYAMSHQDLIDQVDLVILGIKPQLFETVLKPLH--F-KQPIISMAAGISLQRLATF---VGQDLPLLRIMPN------MNA----QILQSST-ALTGNALVSQELQARVRDLTDSFG-STFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLM------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116911 for 1642 contacts (-71.2/contact) +
2D Compatibility (PS) -24558 + (NN) -4737 + (LL) 5256
1D Compatibility (HY) -10400 + (ID) 1900
Total energy: -153250.0 ( -93.33 by residue)
QMean score : 0.300
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