Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSETTIILTDDGVTDIGMARNTIHQMVGLVDDLVASEATASQLREALYAALARGLGFQASVGQSSPLLLRRSVLLSLRGLARRLARIEA-DALTDDIQPRDIVLSAK---ELSEWLQEGDVVTVTIPGGPCTRYRILEGDTSNG
1F66 Chain:C ((44-108))
---------------------------------------------------------HGRVGATAAVYSAAILEYLTAEVLEL-AGNASKDLKVKRITPRHLQLAIRGDEELDSLI---K---ATIAGG---------------
General information:
TITO was launched using:
RESULT:
Template:
1F66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6552 for 314 contacts (-20.9/contact) +
2D Compatibility (PS) -6679 + (NN) -5464 + (LL) 5172
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -16623.0 ( -52.94 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_1F66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F66-query.scw
PDB file :
Tito_Scwrl_1F66.pdb
: