Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKKILGLLGLALAAAFVLTACGQKNDKNTLTVGVMTMTDSDKERWDKIEELLKKENIKLKFKEFTDYSQPNKALKNGEIDINSFQHYNFLNNWNKEN-KGDLVTVAETYISPINLFSGTENGKAKYSSAKEIPNGGQIAIPNDATNESRALYVLQDAGLIKLNVSGDELATVKNIKSNPKNLDIKEVDASQTARNLASVDAAVVNNSYAVPAKIDF-KTSLYKEKVNE-GSKQWINIIAAQKNWKKSKKAAAIKKLIKAYHTDAVKKVIKKTAKGVDEPVW |
| 1P99 Chain:A ((40-280)) | ------------------------------KVTIGVASND---TKAWEKVKELAKKDDIDVEIKHFSDYNLPNKALNDGDIDMNAFQHFAFLDQYKKAHKGTKISALSTTVLAPLGIYS------DKIKDVKKVKDGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVKDITSNPKHLKITAVDAQQTARALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNSDAVKPYINIVAVNDK---DLDNKTYAKIVELYHSKEAQKALQEDVKDGEKPVN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1P99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -53911 for 2012 contacts (-26.8/contact) +
2D Compatibility (PS) -24985 + (NN) -7507 + (LL) 2384
1D Compatibility (HY) -17200 + (ID) 4600
Total energy: -105819.0 ( -52.59 by residue)
QMean score : 0.410
|
|
|