Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMVMKRPSLRQFSWLLGGSLLLGALFWLWLAVQQQEATLAIRPVGQGIGMPDGFSVWHHLDANGIRFKSITPQK--------DGLLIKFDSTAQGAAAKEVLGRALPHGYIIALLEDDNSPTAWLSRLRDAPHRLG
3BS9 Chain:A ((6-77))
-----------------------------------HFHVFVGDLSPEITT---AAIAAAFAPFG-RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BS9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41464 for 439 contacts (-94.5/contact) +
2D Compatibility (PS) -6997 + (NN) -1171 + (LL) 4788
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -46844.0 ( -106.71 by residue)
QMean score : 0.174
(partial model without unconserved sides chains):
PDB file :
Tito_3BS9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BS9-query.scw
PDB file :
Tito_Scwrl_3BS9.pdb
: