Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MLTVEVEV---KITADDENKAEEIVKRVIDEVEREVQKQY-PNATITRTLTRDDGTVELRIKV--KADTEEKAKSIIKLIEERIEEELRKRDPNATITRTVRTEV------GSSWSLEHHHHHH
1DPT Chain:A ((1-117))
PFLELDTNLPANRVPAGLEKRLCAAAASILGKPADRVNVTVRPGLAMALS-GSTEPCAQLSISSIGVVGTAEDNRSHSAHFFEFLTKEL-ALGQDRILIRFFPLESWQIGKIGTVMTFL------
General information:
TITO was launched using:
RESULT:
Template:
1DPT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8733 for 692 contacts (-12.6/contact) +
2D Compatibility (PS) -11564 + (NN) -4362 + (LL) 540
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -28519.0 ( -41.21 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_1DPT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DPT-query.scw
PDB file :
Tito_Scwrl_1DPT.pdb
: