Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRLLLITLLIGYIYPCVAQDKPIRTEESLEGTVIYKKTTTFEVDGYTYQCDVDDGSQFVTLYNKENKLTYEKIVYKDTGKTYIGSWSSNVIEYDRFMSQQADFIVDQAFTKAMADEIGKTELMITMLLSPNTGEVMEV-NFNFFTFEPYAKVPLHVYREIEVKLKEQIHFKPIEEGKQLNYIMLAWM--QKPQGKLPPLPPPGSLM-
2HFT Chain:? ((107-218))
----------------------------NL-GQP---TIQSFEQVGTKVNVTVED------------ERT---LVRRN----------------NTFLS--------------LRDVFGK-DLIYTLYYWKSSGKKTAKTNTNEFLID-------------------------VDKGENYCFSVQAVIPSRTVNRKST--DSPVECMG
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56137 for 631 contacts (-89.0/contact) +
2D Compatibility (PS) -10930 + (NN) -4592 + (LL) 8468
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -70041.0 ( -111.00 by residue)
QMean score : 0.209
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: