Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLPDIVNMYFDA--DSCND---TDALSETFAPDAVVEDEGARHQGVVAILRWWVAAKKAAS-YVAEPLESTV--DGDKALVRAKVSGRFP-GSPVTLT--YSFTIK-DGRIARLEIQ
3ER7 Chain:A ((6-118))
----TTLDRYFDLFDASRTDEKAFDDLISLFSDEITFVLNGQEQHGIDAWKQFVRMVFTANQDIKHMYAGWVPSETGDTMETRWAVCGKSADGSVFTQDGTDIARLNADGKIVYLAN-
General information:
TITO was launched using:
RESULT:
Template:
3ER7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36694 for 628 contacts (-58.4/contact) +
2D Compatibility (PS) -11032 + (NN) -3717 + (LL) 288
1D Compatibility (HY) 400 + (ID) 1200
Total energy: -51955.0 ( -82.73 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_3ER7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ER7-query.scw
PDB file :
Tito_Scwrl_3ER7.pdb
: