Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASWSHPQFEKGADDDDKSEPPVSMLMQVAGAVETSKGGEKWAPVTRNKFLFVGTQVRTGADGGGKLIDQNSGMAQTIGANSVVEITAAGPKAVSGSLSAPEAASGDLVAGLSNRFAEAQRYTTVRRSVKKEAADLKLRVASDITLSPTYPDLVWENMGAQYGYTLVIDGTSHAVPATSGEMVRFRVPSLTPGAHSFGVTVTEGGQAVGQTEKGGTIVWLSATEDKALVDGVARVKAASTGDEFALGNYLDSKGVTVAAMDAYRKHFASHKDDNDMRPLLIKTYNDLKLRDLRQKEALVYNEQLEGNPGFSSISAHHHHHHHHHH |
1NA3 Chain:A ((9-78)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5200 for 502 contacts (10.4/contact) +
2D Compatibility (PS) -7614 + (NN) -5569 + (LL) 13900
1D Compatibility (HY) 2000 + (ID) 600
Total energy: 7317.0 ( 14.58 by residue)
QMean score : 0.115
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