Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQRQPVSSSRILSIGYDPDNRMLEIQ-FREQ---GTYQYLGVP---ERAHQNFMSAVSKGRFFDGVIKGKFLCRKIG
2FFG Chain:A ((35-79))
---------KICSVKYFEKNQTFELTVFQKGEKPNTYPFDNIDMVSIEIFELLQ-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2FFG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1435 for 158 contacts (-9.1/contact) +
2D Compatibility (PS) -3992 + (NN) -2628 + (LL) 2096
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -9209.0 ( -58.28 by residue)
QMean score : 0.204
(partial model without unconserved sides chains):
PDB file :
Tito_2FFG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FFG-query.scw
PDB file :
Tito_Scwrl_2FFG.pdb
: