Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTSVWGKSILALVFTFMCSLAISAASPKDYLYDTKEENGKIISKVVFLQE--NGLLNKQVRYEFQYNENGKVSEKKAFRWDRTNDEWVPFYQITYQYDDQSGEIKTNYGMWDKKKKNFSLNVQNMIIPSTNYEEIFS |
3MSW Chain:A ((45-134)) | -----------------------------------YDTDQQKTVKSTYAWNIFKNTWETESRTVISRYET--ETSVEYSVWNKEKGSFDLSKKYIYITDNNNQLIAQYAYKMNSRTNQWILEKDALT----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7727 for 489 contacts (15.8/contact) +
2D Compatibility (PS) -9626 + (NN) -2630 + (LL) 3400
1D Compatibility (HY) 2800 + (ID) 400
Total energy: 1271.0 ( 2.60 by residue)
QMean score : 0.184
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