Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGLLSNFRNTIIVSFVLALVIVIGYGHSPHGHDATYFQAIFRWLHVLFGILWIGLLYYFNFVQIRVMPQIPAELKPAVSKYIAPEALFWFRWAALATWVMGVLLAYNRGYLVEAFTLGLAGGYTPGVDMGFTFIGTGMWLATVMFFNVWVFIWPNQKIALGIVEADADAKAKAAKTAMLVSRTNTLLSIPMLATMAMHQTLFG |
M042 Chain:A ((100-140)) | ---------------------------------------------------------------------------------------------------VMGVLLAYNRGYLVEAFTLGLAGGYTPGVDMGFTFIGTG------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: M042.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14885 for 172 contacts (-86.5/contact) +
2D Compatibility (PS) -4131 + (NN) 669 + (LL) 16112
1D Compatibility (HY) -7200 + (ID) 1950
Total energy: -11385.0 ( -66.19 by residue)
QMean score : -0.042
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