Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKLYTTLLIACLAAGFTACNDDDCEDLHLGNLAHYPNVLKGTFPTESQVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNPCRADLSCIIKNKYGKVEMSTSFSSNHNFSKGFFYVADGTFNFYDTEKKTAYQDCYASLNAGKTLGIGNYDSANIIHSNGKFYLLVGTST--SNRDHFYIVDAKTLYYENSAVVGANLSGLTILNE-QYGLVTG---DGIRRIDLKSLNNVRIKNERLL----------CFYNSIIYNGKVLSNDTYKDESKVKYYDVNELIAAKEGEAPAVTELDI-IQKQKINFVLAKDGNVYTLESADNGCNIVKIKNDFTLEKVFANFQPAKGPYHSSPTIGMVASETENIIYLVS-TDGAIYKYILGDSDSLKAPFIAAESGVSITAPLQLNQQSGELYVTYTEERKDESKIVVYSK-DGKVLHTVDCGESVPSQILFNN |
| 3VGZ Chain:A ((52-321)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN---------IKLKTAIQNTGKMSTGLALDSEGKRLYTTNA--DGELITIDTADNKILSRKKLLDDGK---EHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA--APES----LAVLFNPARNEAYVTHR----QAGKVSVIDAKSYKVVKTFDTPT-HPNSLAL-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3VGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -57320 for 1987 contacts (-28.8/contact) +
2D Compatibility (PS) -27158 + (NN) -5214 + (LL) 10332
1D Compatibility (HY) 8000 + (ID) 1750
Total energy: -73110.0 ( -36.79 by residue)
QMean score : 0.174
|
|
|