Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ATMAFHPMLCRLELSVSAAPPASPIDATLLRSLITSVLNSSWVDLGGNTANEKVLCAIGLIEAFCRERVIPPTSNSFNTSVTYHIMVED----------LDPDDLGNIQLINKPLLSLEGDLKVLGSYQLTFQTIPGHSEPRSMTDNGIYHSDSPFFQIALGHALLGTGKIYDHITRALRVAPITIAPEKRKEPLSSYMV |
3QRB Chain:A ((141-202)) | ---------------------------------------------------------------------------TYNAAIAYTIVSQDPELPHKNMFTVNR-DTGVISVLTSGL-----DRESYPTYTLVVQAADLQGEGLS--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QRB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7559 for 247 contacts (-30.6/contact) +
2D Compatibility (PS) -5745 + (NN) -3926 + (LL) 9008
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -12522.0 ( -50.70 by residue)
QMean score : 0.033
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