Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSSNGGAIKAVIYDCDGVMFDSFEANLAFYQRIMEMMGRPRLSRDNEEQMRILHTYANREVLAH----FFP---SPGDWEEAVRCAGAIDYRELVPLMIMEEGFREALDTLKG-RVGLGVCTNRSTS-MDMVLRLFSLDSYF--SIVMTASRVTNPKPHPEPLLKVLEHFGIGPREALFVGDSEVDRLSAEAAGVPFVAYKAPL---------PAAYRMEHHREIIDLLG
3QXG Chain:A ((22-238))
-------KKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLS----REEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSIL-FNS-YPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLE-HNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSW-
General information:
TITO was launched using:
RESULT:
Template:
3QXG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130279 for 1680 contacts (-77.5/contact) +
2D Compatibility (PS) -21163 + (NN) -9008 + (LL) 256
1D Compatibility (HY) -9600 + (ID) 2000
Total energy: -171794.0 ( -102.26 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_3QXG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QXG-query.scw
PDB file :
Tito_Scwrl_3QXG.pdb
: