Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GFDPEKAQCCLVENGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVH-------D-FNHRTTSDMWLYRAYSGN---LYHNGEQ-TL------TLSSFTQGDFITCVLDMEARTISFGK-NG-EEPKLAFEDVD-AAELYPCVMFYSSNPGEKVKICDMQMR
4B3N Chain:A ((459-601))
-------------------------TGVLGSQSITSGKHYWEVDVSK---KSA-WILGVCAGFQSDAMYNIEQNENYQPKYGYWVIGLQEGVKYSVFQDGSSHTPFAPFIVPLSVIICPDRVGVFVDYEACTVSFFNITNHGFLIYKFSQCSFSKPVFPYLNPR--KCTVPMTL------
General information:
TITO was launched using:
RESULT:
Template:
4B3N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76500 for 842 contacts (-90.9/contact) +
2D Compatibility (PS) -13309 + (NN) -4942 + (LL) 1136
1D Compatibility (HY) -7200 + (ID) 1250
Total energy: -102065.0 ( -121.22 by residue)
QMean score : 0.272
(partial model without unconserved sides chains):
PDB file :
Tito_4B3N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B3N-query.scw
PDB file :
Tito_Scwrl_4B3N.pdb
: