Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARRTEPPDGGWGWVVVLSAFFQSALVFGVLRSFGVFFVEFVAAFEEQAARVSWIASIGIAVQQFGSPVGSALSTKFGPRPVVMTGGILAALGMLLASFATSL-----THLYLSIGLLSGSGWALTFAPTLACLSCYFSRRRSLATGLALTGVGLSS-FTFAPFFQWL--LSHYAWRGSLLLVSALSLHLVACGALLRPPSLAEDPAVGGPRA-QLTSLLHHGPFLRYTVALTLINTGYFIPYLHLVAHLQDLDWDPLPAAFLL-SVVAISDLVGRVVSGWLGDAVPGPVTRLLMLWTTLTGVSLALFPVAQAPTALVALAVAYGFT-SG-ALAP-LAF-SVLPELIG-TRRIYCGLGLLQMIESIGGLLGPPLSGY-LRDVTGNYTASFVVAGAFLLSGSGILL-TLPHFFCFSTTTSGPQDLVTEALDT-KVPLPKEGLEED |
| 3H9M Chain:A ((2-426)) | SLSFTPLHTT-------SEAFIEKALPWLEDRYFHIAYLNPNGYTAYPQGAFRHYLAFGSEAAIHVSDATRVFETWNEIKKGYTNEWIFVFASYDGKNSVEQLHTSKEAGIAFAAATFFIPEHVWEIQPDGILIHKGSGSSLVTEIQHAQSDIFVKQVVSKESYFNAFDELQQIIAQGDAYEINYCI----PFTAKGNISPAATYQRLNKKTPMPFSVYYKFNT----EYILSASPERFIKKTGDTIISQPIKGTSEKEQSENTMIVDLVRNDLSRTAVA--GSVCVPELSGLYTFPNVHQLISTVQSTIDPACSSIDVIQQA--FPMGSMTGAPKVNVMKFIDRIESMARGPFSG-----------------TVGYMDPH--DNFDFNVLIRSIFYNSATQELFMEAGSAITSYAKAETEYEECLLKITPMIHILN------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -348022 for 3227 contacts (-107.8/contact) +
2D Compatibility (PS) -39281 + (NN) -2375 + (LL) 3156
1D Compatibility (HY) 800 + (ID) 1950
Total energy: -387672.0 ( -120.13 by residue)
QMean score : 0.139
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