Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEDSPTMVRVDSPTMVRGENQVSPCQGRRCFPKALGYVTGDMKELANQLKD--KPVVLQFIDWILRGISQVVFVNNPVSGILILVGLLVQNPWWALTGWLGTVVSTLMALLLSQDRSLIASGLYGYNATLVGVLMAVFS--------DKGDYFWWLLLPVC---AMSMTCPIFSSALNSMLSKWDLPVFTLPFNMALSMYLSATGHYNPFFPAKLVIPITTAPNISWSDLSALELLKSIPVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGIAAGLSLSAPFEDIYFGLWGFNSSLACIAMGGMFMALTWQTHLLALGCALFTAYLGVGMANFMAEVGLPACTWPFCLATLLFLIMTTKNSNIYKMPLSKVTYPEENRIFYLQAKKRMVESPL-- |
| 3SLU Chain:A ((8-371)) | ----------GVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYRHLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTLRSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLIYDSLYFHGQQVAAGDILAAEVVKGGTRHQAFYYRSDKG---GNYYDEDGRV---LQGFNIEPLVYTRISSPFGYRMHPILHTWRLHTGIDYAAPQG-------TPVRASADGVITFKGRKGGYGNAVMIRHANGVETLYAHLSAFSQAQGNVRGGE-----------------------VIGFVGSTGRSTGPHLHYEARING------QPVNPVSVALPTPELT-QADKAAFAAQKQKADALLARLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224621 for 2611 contacts (-86.0/contact) +
2D Compatibility (PS) -35679 + (NN) 1358 + (LL) 5556
1D Compatibility (HY) 5200 + (ID) 1850
Total energy: -250036.0 ( -95.76 by residue)
QMean score : 0.162
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