Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEDKSKRDSIEMSMKGCQTNNGFVHNEDILEQTPDPGSSTDNLKHSTRGILGSQEPDFKGVQPYAGMPKEVLFQFSGQARYRIPREILFWLTVASVLVLIAATIAIIALSPKCLDWWQEGPMYQIY-PRSFKDSNKDGNGDLKGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTMEDFENLVAAIHDKGLKLIIDFIPNHTSDKHIWFQLSRTRTGKYTDYYIWHDCTHENGKTIPPNNWLSVYGNSSWHFDEVRNQCYFHQFMKEQPDLNFRNPDVQEEIKEILRFWLTKGVDGFSLDAVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYSTEPGRYRFMGTEAYAESIDRTVMYYGLPFIQEADFPFNNYLSMLDTVSGNSVYEVITSWMENMPEGKWPNWMIGGPDSSRLTSRLGN-QYVNVMNMLLFTLPGTPITYYGEEIGMGNIVAANLNESYDINTLRSKSPMQWDNSSNAGFSEASNTWLPTNSDYHTVNVDVQKTQPRSALKLYQDLSLLHANELLLNRGWFCHLRNDSHYVVYTRELDGIDRIFIVVLNFGEST-LLNLHNM----ISGLPAKMRIRLSTNSAD-KGSKVDTSGIFLDKGEGLIFEHNTKNLLHRQTAFRDRCFVSNRACYSSVLNILYTSC |
| 2DH2 Chain:A ((8-422)) | ----------------------------------------------------------------------------------------------------------------PAQKWWHTGALYRIGDLQAFQ---GHGAGNLAGLKGRLDYLSSLKVKGLVLGPIHKNQ--KDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYRGE-NSWFS--------------------------------------------------------------TQVDTVATKVKDALEFWLQAGVDGFQVRDIENLKD-----------------------------------ASSFLAEWQNITKGFS--ED--RLLIAGTNSSDLQQILSLLE----SNKDLLLTSSYLSDSGSTGEHTKSLVTQYLNA-TG---NRWCSWSLSQARLLTSFLPAQLLRLYQLMLFTLPGTPVFSYGDEIGLDAAALP--------GQPMEAPVMLWDESSF--------PDIPGAVS-ANMTVKGQSEDPGSLLSLFRRLSDQRSKERSLLHGDFHAFSAGPGLFSYIRHWDQN-ERFLVVLNFGDVGLSAGLQASDLPASASLPAKADLLLSTQPGREEGSPLELERLKLEPHEGLLLRFPYAA------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2DH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -175523 for 3490 contacts (-50.3/contact) +
2D Compatibility (PS) -43434 + (NN) -14581 + (LL) 16240
1D Compatibility (HY) -24400 + (ID) 5400
Total energy: -247098.0 ( -70.80 by residue)
QMean score : 0.478
|
|
|