Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTVEVEVKITADDENKAEEIVKRV-IDEVEREVQKQ-YPNATITRTLTRD-DGTVELRIKV---------KADT-EEKAKSIIKL----IEERIEEELRKRDPNATITRTVRTEVGSSWSLEHHHHHH
1DDF Chain:? ((201-327))
METVAINLS-DVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNE-IQSLVLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
1DDF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 21916 for 638 contacts (34.4/contact) +
2D Compatibility (PS) -11616 + (NN) -3008 + (LL) 396
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: 1438.0 ( 2.25 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_1DDF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DDF-query.scw
PDB file :
Tito_Scwrl_1DDF.pdb
: