Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MVDLKIDVSDDEEAEKIIREIREQWPKATVTRTNGDIKLDAQTEKEAEKMEKAVKKVK----PNATIRKTGGSLEHHHHHH
1UTA Chain:A ((243-319))
KDERRWMVQCGS-FRGAEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG---------
General information:
TITO was launched using:
RESULT:
Template:
1UTA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3240 for 453 contacts (7.2/contact) +
2D Compatibility (PS) -7355 + (NN) -5219 + (LL) 440
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -11194.0 ( -24.71 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_1UTA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UTA-query.scw
PDB file :
Tito_Scwrl_1UTA.pdb
: