Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTFLIIIGLFLFIGNSFAQSYEELIEKSYDFVDKGDLVSAEESLKAAMRKEP---ANPLNYAL---------LTNLGTIQRRQGKLQEALISYTSALSGHTKNITILENRASLYTELGETEKALNDYNTLLIENPEHQEALYCRGLLYIQLQNYMWAEQDFDKILEVNEKSVRAR------------LGHAILEKMRGNYDESERIFNYLISEMPRDWI----LYEGRADLYFMMGKNARAMADIEKVFTESEPTANLYVLRGKIKLAQYEKERAALDFKKAESMGYNKEVIKELLKLTMNN |
2Y4T Chain:A ((85-383)) | -GKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15499 for 2075 contacts (-7.5/contact) +
2D Compatibility (PS) -30069 + (NN) -20761 + (LL) 256
1D Compatibility (HY) 2800 + (ID) 2250
Total energy: -65523.0 ( -31.58 by residue)
QMean score : 0.375
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